/******************************************************************************
	This file is a part of the Snapshot Bioinformatics Project

	Copyright (C) 2012-2013 Jarom Schow

	This program is free software: you can redistribute it and/or modify
	it under the terms of the GNU General Public License as published by
	the Free Software Foundation, either version 3 of the License, or
	(at your option) any later version.

	This program is distributed in the hope that it will be useful,
	but WITHOUT ANY WARRANTY; without even the implied warranty of
	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
	GNU General Public License for more details.

	You should have received a copy of the GNU General Public License
	along with this program.  If not, see <http://www.gnu.org/licenses/>.
******************************************************************************/

#include "SeqFeature.h"

#include "SeqRange.h"

using namespace Bio;

/**
**/
SeqFeature::SeqFeature() : m_featureId( -1 )
{
}

/**
**/
SeqFeature::SeqFeature( const QString &type ) : m_featureId( -1 ),
	m_type( type )
{
}

/**
**/
SeqFeature::~SeqFeature()
{
}

/**
**/
int SeqFeature::getSeqFeatureId() const
{
	return m_featureId;
}

/**
**/
void SeqFeature::setSeqFeatureId( int id )
{
	m_featureId = id;
}

/**
**/
QString SeqFeature::getType() const
{
	return m_type;
}

/**
**/
void SeqFeature::setType( const QString &type )
{
	m_type = type;
}

/**
**/
SeqRange SeqFeature::getLocation() const
{
	return m_location;
}

/**
**/
void SeqFeature::setLocation( const SeqRange &location )
{
	m_location = location;
}

/**
**/
QString SeqFeature::getQualifier( const QString &key ) const
{
	return m_qualifiers.value( key );
}

/**
**/
void SeqFeature::setQualifier( const QString &key, const QString &value )
{
	m_qualifiers[key] = value;
}

/**
**/
QMapIterator<QString, QString> SeqFeature::getQualifierIterator() const
{
	return QMapIterator<QString, QString>( m_qualifiers );
}
